Fitness data for PS417_27975 in Pseudomonas simiae WCS417

type VI secretion protein
SEED: Uncharacterized protein ImpH/VasB
KEGG: type VI secretion system protein ImpH

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.9 -2.4 compare
stress Gentamicin 0.008 mg/ml -0.8 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.8 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x -0.8 -3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.0 compare
carbon source D-Sorbitol (C) -0.7 -2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.3 compare
carbon source Gly-Glu (C) -0.7 -2.6 compare
soil soil sample 3; outgrowth in LB -0.7 -1.5 compare
phage P. simiae OR Antrim MOI 1 -0.7 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -2.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.7 -2.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.1 compare
carbon source Carbon source D-Mannitol 2.5 mM +0.6 +2.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +1.7 compare
carbon source Carbon source D-Mannitol 2.5 mM +0.7 +1.9 compare
seeds Growth on radish seeds for 72 hours +0.8 +1.5 compare
root root sample 6; outgrowth in LB +1.1 +1.6 compare