Fitness data for PS417_27955 in Pseudomonas simiae WCS417

EvpB family type VI secretion protein
SEED: Uncharacterized protein ImpC
KEGG: type VI secretion system protein ImpC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -2.6 compare
soil soil sample 3; outgrowth in LB -0.5 -2.0 compare
phage P. simiae OR Antrim MOI 1 -0.4 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4 -2.1 compare
seeds Growth on radish seeds for 72 hours -0.4 -1.4 compare
solid stress 80% Methanol 3 mM; solid stress +0.3 +2.3 compare
solid stress Scopoletin 1 mM; solid stress +0.4 +2.3 compare
phage P. simiae ORA MOI 0.1 +0.4 +1.5 compare
carbon source Carbon source D-Mannitol 2.5 mM +0.4 +2.2 compare
solid stress Fraxetin 1 mM; solid stress +0.4 +2.4 compare
carbon source D-Galactose (C) +0.4 +2.4 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 +2.0 compare
solid stress Fraxetin 3 mM; solid stress +0.4 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.5 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.8 compare