Fitness data for PS417_27940 in Pseudomonas simiae WCS417

type VI secretion protein
SEED: Uncharacterized protein ImpI/VasC
KEGG: type VI secretion system protein ImpI

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.0 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.9 -1.7 compare
liquid stress 80% Methanol 3 mM; liquid stress -2.3 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.2 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.2 -1.6 compare
root root sample 6; outgrowth in LB -1.9 -1.0 compare
carbon source Carbon source L-Ornithine 10 mM -1.8 -2.2 compare
phage P. simiae Grant Run MOI 10 -1.8 -2.2 compare
phage Wcs_1 -1.7 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -1.4 compare
stress Spectinomycin 0.4 mg/ml -1.5 -1.6 compare
stress R2A with Fusaric 120 ug/mL -1.5 -2.1 compare
carbon source Carbon source D-Mannitol 2.5 mM -1.4 -1.8 compare
nophagecontrol TIme6-nophage +1.4 +2.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +1.4 +3.5 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +1.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +1.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +1.6 +2.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) +1.8 +1.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +2.0 +2.9 compare