Fitness data for PS417_27765 in Pseudomonas simiae WCS417

peptide ABC transporter substrate-binding protein
SEED: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Valine (C) -0.8 -2.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -2.3 compare
stress Nickel (II) chloride 1 mM -0.6 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.4 compare
liquid stress Scopoletin 3 mM; liquid stress -0.5 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.7 compare
phage P. simiae OR Antrim MOI 0.1 -0.5 -2.2 compare
stress Chlorite 4 mM -0.5 -2.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.0 compare
carbon source Carbon source L-Citrulline 5 mM -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.5 compare
phage P. simiae Grant Run MOI 0.1 +0.5 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +2.0 compare
phage P. simiae OR Antrim MOI 1 +0.6 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.1 compare
stress Gentamicin 0.008 mg/ml +0.8 +2.5 compare
stress Neomycin 0.04 mg/ml +1.1 +4.7 compare