Fitness data for PS417_27690 in Pseudomonas simiae WCS417

XRE family transcriptional regulator
SEED: Putrescine utilization regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
carbon source L-Valine (C) -3.4 -4.0 compare
nitrogen source Glycine (N) -2.5 -4.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.9 -2.7 compare
root root sample 6; outgrowth in LB -1.9 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -4.0 compare
carbon source L-Valine (C) -1.7 -2.3 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.4 -2.4 compare
carbon source NAG (C) -1.2 -4.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.5 compare
solid stress Fraxetin 3 mM; solid stress -1.1 -2.2 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +1.2 +3.6 compare
carbon source 2-Deoxy-D-Ribose (C) +1.3 +6.7 compare
carbon source 2-Deoxy-D-Ribose (C) +1.3 +5.1 compare
carbon source Putrescine (C) +1.4 +5.3 compare
carbon source Putrescine (C) +1.6 +7.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.7 +3.1 compare
stress Paraquat dichloride 0.002 mg/ml +1.7 +11.0 compare
stress Paraquat dichloride 0.008 mg/ml +2.9 +16.2 compare