Fitness data for PS417_27630 in Pseudomonas simiae WCS417

MFS transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
soil soil sample 3; outgrowth in LB -0.5 -2.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -1.9 compare
motility inner cut, LB soft agar motility assay -0.3 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.3 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.1 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.3 +1.6 compare
phage JP1 MOI 1 +0.3 +1.2 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.3 compare
solid stress Scopoletin 2 mM; solid stress +0.3 +1.5 compare
stress Chloramphenicol 0.0075 mg/ml +0.3 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.3 +1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.3 +1.5 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.3 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.5 compare
phage JP1 MOI 10 +0.5 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.5 compare