Fitness data for PS417_27455 in Pseudomonas simiae WCS417

isoprenoid biosynthesis protein
SEED: Sigma cross-reacting protein 27A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
rhizosphere rhizosphere sample 1; outgrowth in LB -0.9 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.6 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -1.6 compare
ecofab LB in EcoFAB_3.5mL -0.5 -3.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.0 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.5 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.9 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x -0.4 -2.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.4 -2.3 compare
carbon source D-Alanine (C) -0.4 -2.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.9 compare
carbon source D-Glucose (C) +0.4 +2.2 compare
stress Gentamicin 0.008 mg/ml +0.4 +1.3 compare
solid stress 80% Methanol 3 mM; solid stress +0.4 +2.7 compare
carbon source L-Valine (C) +0.5 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.4 compare
seeds Growth on radish seeds for 72 hours +0.5 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.8 compare
root root sample 6; outgrowth in LB +0.7 +2.6 compare