Fitness data for PS417_27200 in Pseudomonas simiae WCS417

acetylornithine deacetylase
SEED: Acetylornithine deacetylase (EC 3.5.1.16)
KEGG: acetylornithine deacetylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.8 compare
phage JP1 MOI 10 -0.7 -1.3 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.6 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.6 -1.9 compare
motility inner cut, LB soft agar motility assay -0.6 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.1 compare
carbon source acetate (C) -0.6 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.6 -2.0 compare
phage P. simiae ORA MOI 0.1 -0.6 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.3 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.7 +2.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +1.8 compare
phage JP1 MOI 0.1 +0.7 +2.0 compare
phage P. simiae OR1 MOI 0.1 +0.7 +1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.2 +2.2 compare