Fitness data for PS417_27050 in Pseudomonas simiae WCS417

ABC transporter substrate-binding protein
SEED: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8 -2.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -2.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -2.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -3.3 compare
phage P. simiae OR1 MOI 0.1 -0.6 -1.4 compare
stress Neomycin 0.04 mg/ml -0.6 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.6 compare
phage P. simiae OR Antrim MOI 1 -0.5 -1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.0 compare
carbon source Trisodium citrate (C) +0.5 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.8 compare
soil soil sample 4; outgrowth in LB +0.7 +3.1 compare
root root sample 6; outgrowth in LB +0.7 +2.3 compare