Fitness data for PS417_27045 in Pseudomonas simiae WCS417

ATPase
SEED: ATPases of the AAA+ class

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source L-Valine (C) -1.8 -2.2 compare
motility outer cut, LB soft agar motility assay -1.5 -2.4 compare
stress Dimethyl Sulfoxide 5 vol% -1.1 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -1.5 compare
phage JP1 MOI 1 -1.0 -1.5 compare
carbon source 2-Deoxy-D-Ribose (C) -1.0 -2.6 compare
stress Doxycycline hyclate 0.001 mg/ml -1.0 -2.1 compare
soil soil sample 8; outgrowth in LB -0.9 -1.3 compare
phage P. simiae OR Antrim MOI 10 -0.9 -1.7 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.8 -0.9 compare
carbon source L-Arabinose (C) +0.8 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.9 +3.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.9 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +1.5 compare
seeds Growth on radish seeds for 72 hours +1.0 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +2.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.1 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.5 +1.5 compare