Fitness data for PS417_26880 in Pseudomonas simiae WCS417

SAM-dependent methyltransferase
SEED: LSU m5C1962 methyltransferase RlmI
KEGG: ribosomal RNA large subunit methyltransferase I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
seeds Growth on radish seeds for 72 hours -0.8 -3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.3 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.7 -2.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.7 -1.7 compare
nitrogen source Inosine (N) -0.6 -1.8 compare
seeds Growth on radish seeds for 72 hours -0.6 -2.5 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.4 compare
soil soil sample 8; outgrowth in LB -0.5 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.6 compare
soil soil sample 6; outgrowth in LB -0.5 -1.8 compare
phage P. simiae ORA MOI 10 -0.5 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.2 compare
liquid stress Fraxetin 3 mM; liquid stress +0.5 +2.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +1.4 compare
stress Neomycin 0.04 mg/ml +0.6 +3.7 compare
stress Gentamicin 0.008 mg/ml +0.6 +2.5 compare