Fitness data for PS417_26590 in Pseudomonas simiae WCS417

malonate decarboxylase subunit epsilon
SEED: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)
KEGG: malonate decarboxylase epsilon subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.3 compare
solid stress Scopoletin 2 mM; solid stress -0.6 -1.7 compare
phage P. simiae OR Antrim MOI 10 -0.5 -1.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.5 -1.7 compare
carbon source D-Sorbitol (C) -0.5 -1.3 compare
phage P. simiae ORA MOI 10 -0.5 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.0 compare
phage P. simiae ORA MOI 0.1 +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +1.8 compare
phage P. simiae ORA MOI 0.1 +0.6 +1.7 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x +0.7 +2.0 compare
phage P. simiae Grant Run MOI 0.1 +0.8 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +1.5 compare