Fitness data for PS417_26370 in Pseudomonas simiae WCS417

RNA helicase
SEED: ATP-dependent 23S rRNA helicase DbpA
KEGG: ATP-independent RNA helicase DbpA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.9)


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group condition fitness t score  
stress Cisplatin 0.01 mg/ml -3.8 -3.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -3.1 -3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.0 -4.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -2.8 -3.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -2.7 -3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.3 -4.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -2.3 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.3 -3.7 compare
soil soil sample 2; outgrowth in LB -2.2 -3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.2 -4.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.2 -2.1 compare
seeds Growth on radish seeds for 72 hours -2.1 -3.2 compare
root root sample 6; outgrowth in LB -2.1 -3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.1 -3.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.1 -4.9 compare
agar plate interaction control Taped volatile agar plate with no fungus -2.0 -1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.9 -3.0 compare
stress Neomycin 0.04 mg/ml +1.9 +9.3 compare
stress Doxycycline hyclate 0.001 mg/ml +1.9 +5.8 compare
stress Gentamicin 0.008 mg/ml +4.1 +17.5 compare