Fitness data for PS417_26330 in Pseudomonas simiae WCS417

beta-aspartyl peptidase
SEED: High-affinity choline uptake protein BetT
KEGG: high-affinity choline transport protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
solid stress Fraxetin 3 mM; solid stress -0.8 -4.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.3 compare
liquid stress Fraxetin 3 mM; liquid stress -0.7 -2.8 compare
solid stress Fraxetin 3 mM; solid stress -0.7 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -3.2 compare
solid stress Fraxetin 2 mM; solid stress -0.6 -2.3 compare
solid stress Fraxetin 2 mM; solid stress -0.6 -2.2 compare
liquid stress Fraxetin 3 mM; liquid stress -0.5 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.9 compare
motility outer cut, LB soft agar motility assay +0.6 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.3 compare
stress methylglyoxal 0.032 vol% +0.7 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.8 +3.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.3 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.9 +2.9 compare
stress Gentamicin 0.008 mg/ml +1.7 +3.5 compare
stress Paraquat dichloride 0.002 mg/ml +2.0 +12.9 compare
stress Thallium(I) acetate 0.0625 mg/ml +3.3 +18.0 compare
stress Paraquat dichloride 0.008 mg/ml +4.4 +28.5 compare