Fitness data for PS417_26310 in Pseudomonas simiae WCS417

serine dehydratase
SEED: L-serine dehydratase (EC 4.3.1.17)
KEGG: L-serine dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -1.5 -4.6 compare
soil soil sample 5; outgrowth in LB -1.2 -3.4 compare
root root sample 6; outgrowth in LB -0.8 -2.3 compare
soil soil sample 3; outgrowth in LB -0.7 -2.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.7 -1.8 compare
supernatant control Vogels_fungal_media 0.1X -0.7 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -2.4 compare
carbon source L-Valine (C) -0.6 -1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.6 compare
stress methylglyoxal 0.032 vol% -0.5 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +2.1 compare
stress Benzalkonium Chloride 0.012 mg/ml +0.6 +4.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.7 compare
seeds Growth on radish seeds for 24 hours +0.7 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.8 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.0 +3.2 compare