Fitness data for PS417_26120 in Pseudomonas simiae WCS417

hypothetical protein
SEED: YheO-like PAS domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.9 -2.1 compare
seeds Growth on radish seeds for 72 hours -2.1 -1.6 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.8 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.7 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.3 -1.4 compare
carbon source 2-Deoxy-D-Ribose (C) -1.3 -2.8 compare
nophagecontrol Only library -1.3 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.2 compare
phage P. simiae ORA MOI 0.1 -1.2 -1.6 compare
carbon source Carbon source L-Citrulline 10 mM -1.1 -2.0 compare
solid stress 80% Methanol 2 mM; solid stress +1.2 +2.3 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x +1.2 +2.1 compare
stress Nalidixic 0.015 mg/ml +1.2 +1.4 compare
phage P. simiae ORA MOI 0.1 +1.4 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.4 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.4 +2.3 compare
phage JP1 MOI 0.1 +1.5 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +3.6 +2.3 compare