Fitness data for PS417_25915 in Pseudomonas simiae WCS417

carbon-nitrogen hydrolase
SEED: 5-aminopentanamidase (EC 3.5.1.30)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
soil soil sample 5; outgrowth in LB -2.4 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.1 -3.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -2.1 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.2 -1.5 compare
phage P. simiae Grant Run MOI 10 -1.2 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.2 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.1 -2.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.1 -1.3 compare
phage P. simiae Grant Run MOI 0.1 -1.1 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.1 -2.2 compare
phage P. simiae Grant Run MOI 10 -1.1 -1.8 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.0 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.0 compare
nophagecontrol Only library -1.0 -1.6 compare
phage Wcs_0.1 -0.9 -2.3 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +1.0 +2.3 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.0 +2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB +1.0 +2.3 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +1.0 +2.2 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.5 +3.1 compare