Fitness data for PS417_25900 in Pseudomonas simiae WCS417

LysR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.9 compare
phage P. simiae OR1 MOI 0.1 -0.6 -1.3 compare
seeds Growth on radish seeds for 72 hours -0.5 -1.7 compare
phage P. simiae Grant Run MOI 0.1 -0.5 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.5 compare
carbon source L-Valine (C) -0.5 -1.5 compare
stress R2A with Fusaric 120 ug/mL -0.5 -2.8 compare
phage P. simiae ORA MOI 0.1 -0.5 -1.6 compare
solid stress 80% Methanol 0.5 mM; solid stress -0.5 -1.9 compare
carbon source Ethanol (C) -0.5 -2.5 compare
stress R2A with Fusaric 120 ug/mL -0.4 -2.0 compare
solid stress Scopoletin 0.5 mM; solid stress +0.4 +2.5 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.4 +1.1 compare
phage JP1 MOI 1 +0.5 +1.4 compare
motility_chemotaxis Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.5 compare
nophagecontrol TIme6-nophage +0.5 +2.3 compare
soil soil sample 2; outgrowth in LB +0.5 +1.2 compare
root root sample 6; outgrowth in LB +0.8 +3.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +2.1 compare