Fitness data for PS417_25270 in Pseudomonas simiae WCS417

NrdR family transcriptional regulator
SEED: Ribonucleotide reductase transcriptional regulator NrdR
KEGG: transcriptional repressor NrdR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.7)


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group condition fitness t score  
motility inner cut, LB soft agar motility assay -2.7 -4.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.1 -1.8 compare
motility outer cut, LB soft agar motility assay -2.0 -3.8 compare
phage JP1 MOI 1 -1.9 -2.0 compare
seeds Growth on radish seeds for 72 hours -1.9 -2.4 compare
liquid stress Scopoletin 3 mM; liquid stress -1.8 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.7 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.9 +3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.9 +4.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.0 +7.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.0 +5.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.0 +8.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +2.1 +4.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +2.2 +6.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +2.3 +7.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +2.5 +11.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +2.5 +5.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +2.6 +4.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.9 +6.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +3.2 +9.1 compare