Fitness data for PS417_25120 in Pseudomonas simiae WCS417

capsular biosynthesis protein
SEED: Capsular polysaccharide synthesis enzyme CpsC, polysaccharide export
KEGG: polysaccharide export outer membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.8 -4.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 -2.6 compare
soil soil sample 7; outgrowth in LB -1.4 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -3.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.3 -2.7 compare
phage P. simiae OR Antrim MOI 1 -1.3 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.5 compare
soil soil sample 8; outgrowth in LB -1.1 -1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.1 -1.9 compare
solid stress Fraxetin 3 mM; solid stress +1.1 +4.2 compare
stress methylglyoxal 0.032 vol% +1.1 +1.9 compare
phage Wcs_0.1 +1.1 +2.8 compare
phage P. simiae OR1 MOI 0.1 +1.2 +2.9 compare
stress Neomycin 0.04 mg/ml +1.4 +2.8 compare
stress Nalidixic 0.025 mg/ml +1.5 +3.3 compare
stress Tetracycline 0.001 mg/ml +1.6 +3.8 compare
stress Gentamicin 0.008 mg/ml +1.6 +3.4 compare
phage Wcs_1 +2.3 +4.8 compare
stress Doxycycline hyclate 0.001 mg/ml +3.0 +4.6 compare