Fitness data for PS417_24945 in Pseudomonas simiae WCS417

LuxR family transcriptional regulator
KEGG: two-component system, NarL family, captular synthesis response regulator RcsB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
root root sample 6; outgrowth in LB -0.5 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.4 compare
stress Benzalkonium Chloride 0.012 mg/ml -0.4 -1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -1.6 compare
stress Neomycin 0.04 mg/ml -0.4 -1.4 compare
stress 2-Furfuraldehyde 0.03 vol% +0.4 +2.5 compare
phage Wcs_0.1 +0.4 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.8 compare
stress LB_noSalt with Chloride 1100 mM +0.4 +2.5 compare
stress methylglyoxal 0.032 vol% +0.4 +1.3 compare
stress 6-methoxy-2(3H)-benzoxazolone 1.2 mM +0.4 +2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +3.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.6 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.9 compare