Fitness data for PS417_24800 in Pseudomonas simiae WCS417

UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
SEED: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)
KEGG: UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.6)


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group condition fitness t score  
solid stress Fraxetin 3 mM; solid stress -8.6 -6.0 compare
solid stress Fraxetin 3 mM; solid stress -7.1 -4.9 compare
soil soil sample 3; outgrowth in LB -4.7 -3.6 compare
solid stress Fraxetin 3 mM; solid stress -4.6 -6.0 compare
stress R2A with Fusaric 120 ug/mL -3.7 -5.8 compare
solid stress Fraxetin 3 mM; solid stress -3.6 -4.4 compare
stress R2A with Fusaric 120 ug/mL -3.5 -6.2 compare
stress R2A with Fusaric 120 ug/mL -3.5 -5.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -3.5 -5.9 compare
root root sample 6; outgrowth in LB -3.4 -3.1 compare
soil soil sample 4; outgrowth in LB -3.4 -3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.3 -3.5 compare
stress R2A with Fusaric 120 ug/mL -3.2 -7.8 compare
soil soil sample 5; outgrowth in LB -3.1 -3.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.9 -3.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.8 -4.1 compare
stress R2A with Fusaric 120 ug/mL -2.6 -5.9 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x +2.6 +9.9 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +2.8 +19.0 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +3.0 +19.7 compare