Fitness data for PS417_24625 in Pseudomonas simiae WCS417

(dimethylallyl)adenosine tRNA methylthiotransferase
SEED: tRNA-i(6)A37 methylthiotransferase
KEGG: bifunctional enzyme involved in thiolation and methylation of tRNA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
soil soil sample 7; outgrowth in LB -1.1 -3.8 compare
soil soil sample 5; outgrowth in LB -0.9 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.9 -2.4 compare
carbon source Gly-Glu (C) -0.9 -4.2 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -2.3 compare
soil soil sample 3; outgrowth in LB -0.9 -2.5 compare
motility outer cut, LB soft agar motility assay -0.8 -4.7 compare
stress Benzalkonium Chloride 0.012 mg/ml -0.8 -2.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.8 -1.8 compare
solid stress Fraxetin 3 mM; solid stress -0.8 -2.4 compare
motility inner cut, LB soft agar motility assay -0.7 -3.2 compare
carbon source Gly-Glu (C) -0.7 -3.6 compare
motility outer cut, LB soft agar motility assay -0.7 -3.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -2.1 compare
phage P. simiae OR1 MOI 0.1 -0.7 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.5 compare
nitrogen source Adenine (N) +0.8 +6.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.2 compare
stress Gentamicin 0.008 mg/ml +0.9 +2.7 compare
stress Neomycin 0.04 mg/ml +0.9 +5.2 compare