Fitness data for PS417_02455 in Pseudomonas simiae WCS417

putative transporter, required for glycine utilization (from data)
Original annotation: membrane protein
SEED: putative membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source Glycine (N) -5.0 -6.2 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.4 -3.3 compare
soil soil sample 8; outgrowth in LB -1.0 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.8 -2.5 compare
solid stress 80% Methanol 3 mM; solid stress -0.8 -3.0 compare
solid stress Scopoletin 3 mM; solid stress -0.8 -2.5 compare
phage JP1 MOI 10 -0.8 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.5 compare
solid stress Scopoletin 3 mM; solid stress -0.7 -2.8 compare
phage P. simiae Grant Run MOI 0.1 -0.7 -2.0 compare
solid stress Scopoletin 2 mM; solid stress -0.7 -2.6 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.7 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -0.9 compare
carbon source Carbon source D-Mannitol 5 mM +0.7 +2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +1.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.7 +1.4 compare
seeds Growth on radish seeds for 24 hours +1.0 +2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +3.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.4 +1.5 compare