Fitness data for PS417_24510 in Pseudomonas simiae WCS417

AsnC family transcriptional regulator
SEED: Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system
KEGG: Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage JP1 MOI 0.1 -0.9 -2.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -1.9 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.7 -1.7 compare
soil soil sample 8; outgrowth in LB -0.7 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.7 compare
soil soil sample 7; outgrowth in LB -0.6 -1.2 compare
carbon source L-Valine (C) -0.6 -1.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.6 compare
stress LB_noSalt with Chloride 1100 mM -0.5 -2.2 compare
phage JP1 MOI 10 -0.5 -1.3 compare
seeds Growth on radish seeds for 24 hours +0.5 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.1 compare
carbon source Carbon source D-Mannitol 5 mM +0.6 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.5 compare
stress Phosphomycin 0.001 mg/ml +0.8 +1.1 compare
seeds Growth on radish seeds for 72 hours +0.8 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.9 compare