Fitness data for PS417_24450 in Pseudomonas simiae WCS417

membrane protein
SEED: Hexuronate transporter
KEGG: MFS transporter, ACS family, hexuronate transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.6 compare
phage P. simiae OR Antrim MOI 0.1 -0.3 -1.9 compare
seeds Growth on radish seeds for 72 hours -0.3 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X +0.3 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.3 compare
soil soil sample 7; outgrowth in LB +0.3 +1.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.3 +2.2 compare
soil soil sample 8; outgrowth in LB +0.3 +0.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.7 compare
root root sample 6; outgrowth in LB +0.4 +0.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.5 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.8 compare
soil soil sample 4; outgrowth in LB +0.5 +1.5 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.6 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +2.1 compare
soil soil sample 6; outgrowth in LB +0.6 +1.7 compare
soil soil sample 2; outgrowth in LB +0.6 +1.7 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.6 +1.5 compare