Fitness data for PS417_24395 in Pseudomonas simiae WCS417

hemolysin D
SEED: ABC exporter for hemopore HasA, membrane fusion protein (MFP) family component HasE
KEGG: protease secretion protein HasE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -3.3 compare
stress Gentamicin 0.008 mg/ml -1.2 -3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.6 compare
seeds Growth on radish seeds for 72 hours -0.6 -2.1 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.5 +1.7 compare
phage P. simiae OR Antrim MOI 1 +0.5 +1.1 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.5 +1.6 compare
soil soil sample 7; outgrowth in LB +0.5 +2.0 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +1.7 compare
carbon source 2-Deoxy-D-Ribose (C) +0.6 +1.8 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.6 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.5 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.7 +1.9 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.8 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.0 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +2.8 compare