Fitness data for PS417_24360 in Pseudomonas simiae WCS417

aldehyde oxidase
SEED: Periplasmic aromatic aldehyde oxidoreductase, molybdenum binding subunit YagR
KEGG: xanthine dehydrogenase YagR molybdenum-binding subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.6 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.7 compare
root root sample 6; outgrowth in LB -0.5 -1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.5 -2.4 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.1 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.5 -2.4 compare
soil soil sample 7; outgrowth in LB -0.5 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -2.1 compare
stress Phosphomycin 0.002 mg/ml +0.5 +0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.1 compare
stress Phosphomycin 0.003 mg/ml +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.5 compare
phage JP1 MOI 1 +0.5 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.1 compare
stress Phosphomycin 0.001 mg/ml +0.7 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.8 +2.9 compare
carbon source L-Valine (C) +1.2 +2.8 compare