Fitness data for PS417_24335 in Pseudomonas simiae WCS417

50S rRNA methyltransferase
SEED: 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-)
KEGG: ribosomal RNA small subunit methyltransferase C

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -3.3 compare
phage Wcs_1 -0.7 -2.9 compare
soil soil sample 7; outgrowth in LB -0.7 -2.4 compare
soil soil sample 4; outgrowth in LB -0.7 -2.5 compare
phage P. simiae OR1 MOI 0.1 -0.6 -1.8 compare
soil soil sample 2; outgrowth in LB -0.6 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.7 compare
phage P. simiae OR Antrim MOI 0.1 -0.6 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.2 compare
soil soil sample 8; outgrowth in LB -0.5 -2.1 compare
motility outer cut, LB soft agar motility assay -0.5 -3.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.4 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.2 compare
seeds Growth on radish seeds for 72 hours -0.5 -2.4 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -2.4 compare
stress Gentamicin 0.008 mg/ml +1.1 +5.1 compare