Fitness data for PS417_24100 in Pseudomonas simiae WCS417

transcriptional regulator PdhR
SEED: Lactate-responsive regulator LldR in Enterobacteria, GntR family
KEGG: GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
carbon source Gly-Glu (C) -3.6 -8.8 compare
carbon source L-Leucine (C) -3.4 -7.3 compare
carbon source L-Leucine (C) -3.3 -10.1 compare
carbon source Gly-Glu (C) -3.0 -9.4 compare
carbon source NAG (C) -2.4 -8.4 compare
carbon source NAG (C) -2.2 -9.3 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.8 -5.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.8 -4.7 compare
carbon source L-Valine (C) -1.5 -4.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.4 -4.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.3 -5.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.2 +4.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.3 +5.7 compare
soil soil sample 5; outgrowth in LB +1.3 +8.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.4 +6.8 compare
solid stress Fraxetin 3 mM; solid stress +1.4 +9.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.5 +3.3 compare
solid stress Fraxetin 3 mM; solid stress +1.7 +11.7 compare
carbon source pyruvate (C) +3.0 +18.3 compare
carbon source pyruvate (C) +3.4 +18.7 compare