Fitness data for PS417_23860 in Pseudomonas simiae WCS417

Rieske (2Fe-2S) protein
SEED: UDP-N-acetylmuramic acid hydroxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil soil sample 7; outgrowth in LB -1.0 -2.2 compare
seeds Growth on radish seeds for 72 hours -0.8 -2.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.7 -1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.6 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.8 compare
carbon source L-Leucine (C) -0.5 -1.8 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x -0.5 -2.7 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.5 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.5 compare
carbon source D-Mannose (C) +0.5 +1.8 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.1 compare
liquid stress Fraxetin 3 mM; liquid stress +0.6 +2.6 compare
seeds Growth on radish seeds for 72 hours +0.6 +1.8 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.6 +1.7 compare
nophagecontrol Only library +0.7 +3.0 compare
stress methylglyoxal 0.032 vol% +0.7 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.8 compare