Fitness data for PS417_23855 in Pseudomonas simiae WCS417

ABC transporter substrate-binding protein
SEED: Periplasmic hemin-binding protein
KEGG: iron complex transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.6 -1.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.8 -1.4 compare
phage JP1 MOI 1 -1.4 -1.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -1.5 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -1.2 -1.6 compare
soil soil sample 5; outgrowth in LB -1.2 -0.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.2 -1.7 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.2 -1.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.2 -1.0 compare
root root sample 6; outgrowth in LB -1.2 -1.0 compare
phage P. simiae Grant Run MOI 0.1 -1.1 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.3 compare
phage P. simiae OR Antrim MOI 0.1 -1.1 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.7 compare
seeds Growth on radish seeds for 72 hours +1.1 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.2 +2.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +1.0 compare
nophagecontrol Only library +1.6 +3.3 compare