Fitness data for PS417_23775 in Pseudomonas simiae WCS417

exodeoxyribonuclease V subunit beta
SEED: Exodeoxyribonuclease V beta chain (EC 3.1.11.5)
KEGG: exodeoxyribonuclease V beta subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.4)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.7 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.1 -2.3 compare
stress Spectinomycin 0.4 mg/ml -4.0 -3.3 compare
stress methylglyoxal 0.032 vol% -3.9 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.8 -2.5 compare
motility inner cut, LB soft agar motility assay -3.8 -2.9 compare
stress Gentamicin 0.008 mg/ml -3.6 -2.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -3.0 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.0 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.0 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -3.0 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.9 -1.5 compare
carbon source 2-Deoxy-D-Ribose (C) -2.8 -3.7 compare
motility outer cut, LB soft agar motility assay -2.8 -2.6 compare
phage Wcs_1 -2.7 -1.9 compare
nitrogen source Adenine (N) -2.6 -3.7 compare
carbon source L-Isoleucine (C) -2.5 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.4 -2.3 compare
phage JP1 MOI 1 +3.1 +5.6 compare