Fitness data for PS417_23725 in Pseudomonas simiae WCS417

methylmalonate-semialdehyde dehydrogenase
SEED: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
KEGG: methylmalonate-semialdehyde dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
carbon source L-Valine (C) -4.9 -2.0 compare
carbon source L-Valine (C) -4.0 -2.9 compare
carbon source L-Leucine (C) -3.2 -4.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.7 -1.8 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.6 -3.8 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -1.5 -2.8 compare
soil soil sample 8; outgrowth in LB -1.4 -1.5 compare
stress Nalidixic 0.015 mg/ml -1.4 -2.1 compare
carbon source L-Leucine (C) -1.3 -2.4 compare
stress Gentamicin 0.008 mg/ml -1.2 -2.5 compare
carbon source Xylitol (C) -1.2 -3.1 compare
phage P. simiae ORA MOI 0.1 -1.1 -1.7 compare
carbon source Gly-Glu (C) -1.1 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.1 -2.2 compare
soil soil sample 5; outgrowth in LB -1.0 -1.3 compare
carbon source D-Mannose (C) +1.0 +3.0 compare
motility_chemotaxis Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +1.0 +3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.5 +2.1 compare