Fitness data for PS417_23605 in Pseudomonas simiae WCS417

permease DsdX
SEED: Gluconate transporter family protein
KEGG: gluconate:H+ symporter, GntP family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.7 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.6 compare
phage JP1 MOI 10 -0.7 -1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.6 compare
carbon source Carbon source D-Mannitol 5 mM -0.6 -2.6 compare
solid stress Fraxetin 2 mM; solid stress -0.6 -2.6 compare
phage P. simiae ORA MOI 0.1 -0.6 -1.3 compare
no stress control TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2 +0.6 +2.4 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1 +0.6 +2.3 compare
phage P. simiae OR Antrim MOI 10 +0.6 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.5 compare
root root sample 6; outgrowth in LB +0.7 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.8 compare
phage Wcs_0.1 +0.7 +2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +2.3 compare
seeds Growth on radish seeds for 72 hours +1.0 +1.8 compare