Fitness data for PS417_23600 in Pseudomonas simiae WCS417

RpiR family transcriptional regulator
SEED: Transcriptional regulator, RpiR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. simiae Grant Run MOI 0.1 -1.1 -3.8 compare
motility inner cut, LB soft agar motility assay -0.7 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.8 compare
phage P. simiae Grant Run MOI 10 -0.6 -2.0 compare
nophagecontrol Only library -0.6 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.3 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -1.5 compare
stress Bacitracin 1 mg/ml -0.5 -2.6 compare
phage P. simiae OR1 MOI 0.1 -0.5 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.7 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.5 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.3 compare
motility inner cut, LB soft agar motility assay -0.4 -2.0 compare
stress Doxycycline hyclate 0.001 mg/ml -0.4 -1.5 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.5 +2.3 compare
solid stress 80% Methanol 1 mM; solid stress +0.5 +2.1 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.6 +2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.2 compare