Fitness data for PS417_23595 in Pseudomonas simiae WCS417

D-aminoacylase
SEED: N-acyl-D-amino-acid deacylase (EC 3.5.1.81)
KEGG: N-acyl-D-amino-acid deacylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
rhizosphere rhizosphere sample 2; outgrowth in LB -0.8 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -2.1 compare
solid stress 80% Methanol 2 mM; solid stress -0.7 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -3.2 compare
phage JP1 MOI 1 -0.6 -1.7 compare
liquid stress 80% Methanol 3 mM; liquid stress -0.5 -1.9 compare
motility inner cut, LB soft agar motility assay -0.5 -1.8 compare
liquid stress Scopoletin 3 mM; liquid stress -0.5 -2.4 compare
soil soil sample 2; outgrowth in LB -0.5 -2.2 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 2 +0.5 +2.0 compare
stress Nalidixic 0.025 mg/ml +0.5 +2.4 compare
soil soil sample 4; outgrowth in LB +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.6 compare
phage Wcs_0.1 +0.7 +2.2 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +3.1 compare