Fitness data for PS417_23585 in Pseudomonas simiae WCS417

chemotaxis protein
SEED: Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
KEGG: methyl-accepting chemotaxis protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
soil soil sample 5; outgrowth in LB -0.5 -1.8 compare
motility outer cut, LB soft agar motility assay -0.5 -2.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.8 compare
phage P. simiae Grant Run MOI 0.1 -0.5 -2.5 compare
motility outer cut, LB soft agar motility assay -0.5 -2.8 compare
soil soil sample 8; outgrowth in LB -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4 -1.7 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 -2.4 compare
motility outer cut, LB soft agar motility assay -0.4 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.7 compare
phage P. simiae OR Antrim MOI 10 -0.4 -1.5 compare
motility inner cut, LB soft agar motility assay -0.4 -2.1 compare
phage P. simiae Grant Run MOI 10 -0.4 -1.7 compare
liquid stress Fraxetin 3 mM; liquid stress -0.3 -2.1 compare
motility outer cut, LB soft agar motility assay -0.3 -1.8 compare
ecofab LB 0.5x in EcoFAB_3.5mL -0.3 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +0.9 compare
phage P. simiae OR1 MOI 0.1 +0.4 +1.8 compare