Fitness data for PS417_00235 in Pseudomonas simiae WCS417

HAD family hydrolase
SEED: Phosphoglycolate phosphatase (EC 3.1.3.18)
KEGG: phosphoglycolate phosphatase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. simiae OR Antrim MOI 10 -0.8 -3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.4 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.6 -2.4 compare
seeds Growth on radish seeds for 72 hours -0.6 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5 -1.4 compare
phage P. simiae ORA MOI 10 -0.5 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.5 compare
phage P. simiae OR Antrim MOI 1 -0.5 -1.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.6 +1.8 compare
carbon source L-Valine (C) +0.8 +3.0 compare
stress Doxycycline hyclate 0.001 mg/ml +0.8 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.0 compare