Fitness data for PS417_23505 in Pseudomonas simiae WCS417

cell division protein DedD
SEED: FIG00953380: hypothetical protein
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
root root sample 6; outgrowth in LB -1.2 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -2.0 compare
carbon source D-Glucose (C) -0.9 -1.9 compare
phage JP1 MOI 0.1 -0.9 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.5 compare
stress 2-Furfuraldehyde 0.03 vol% -0.8 -1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.7 +1.6 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.7 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.7 +1.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.8 +1.1 compare
seeds Growth on radish seeds for 72 hours +0.8 +1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.8 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +0.8 compare
seeds Growth on radish seeds for 72 hours +0.9 +2.2 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +1.0 +2.1 compare
phage Wcs_1 +1.3 +1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.8 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.1 +6.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +4.8 +4.2 compare