Fitness data for PS417_23345 in Pseudomonas simiae WCS417

amino acid ABC transporter substrate-binding protein
SEED: Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4)
KEGG: general L-amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -0.9 compare
no stress control on plate growth on LB_noSalt plate -0.5 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +1.0 compare
phage P. simiae ORA MOI 1 +0.5 +1.7 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.5 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +2.1 compare
phage P. simiae OR1 MOI 0.1 +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.6 +1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +2.2 compare
stress methylglyoxal 0.032 vol% +0.7 +1.7 compare
phage P. simiae OR Antrim MOI 10 +0.7 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +1.3 compare
phage JP1 MOI 1 +0.8 +2.0 compare
phage JP1 MOI 10 +0.8 +1.6 compare