Fitness data for PS417_23000 in Pseudomonas simiae WCS417

PTS N-acetyl-D-glucosamine transporter
SEED: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
KEGG: PTS system, N-acetylglucosamine-specific IIB component ; PTS system, N-acetylglucosamine-specific IIC component

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source NAG (C) -4.5 -8.9 compare
carbon source NAG (C) -4.2 -9.1 compare
stress Gentamicin 0.008 mg/ml -0.4 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.6 compare
stress methylglyoxal 0.032 vol% -0.4 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.3 -1.9 compare
seeds Growth on radish seeds for 72 hours -0.3 -2.0 compare
phage P. simiae ORA MOI 0.1 -0.3 -1.7 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.3 -1.9 compare
liquid stress Scopoletin 3 mM; liquid stress +0.3 +2.2 compare
soil soil sample 4; outgrowth in LB +0.3 +1.3 compare
carbon source Trisodium citrate (C) +0.3 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.4 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.4 +2.1 compare
carbon source D-Glucosamine Hydrochloride (C) +0.5 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.2 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +1.6 compare
carbon source D-Glucosamine Hydrochloride (C) +0.6 +2.4 compare