Fitness data for PS417_22640 in Pseudomonas simiae WCS417

cytochrome C biogenesis protein CcmE
SEED: C4-dicarboxylate transport sensor protein
KEGG: two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
carbon source a-Ketoglutaric (C) -2.1 -6.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.7 -2.8 compare
seeds Growth on radish seeds for 72 hours -1.4 -2.9 compare
carbon source a-Ketoglutaric (C) -1.4 -3.0 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -1.2 -3.7 compare
phage JP1 MOI 1 -1.0 -2.1 compare
carbon source D-Sorbitol (C) -1.0 -3.1 compare
motility inner cut, LB soft agar motility assay -1.0 -2.7 compare
phage JP1 MOI 10 -0.9 -1.7 compare
stress Choline chloride 300 mM -0.9 -2.3 compare
nitrogen source Inosine (N) -0.9 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.3 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.9 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +1.8 compare
seeds Growth on radish seeds for 72 hours +1.0 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.8 compare
stress 2-Furfuraldehyde 0.03 vol% +1.1 +2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +2.2 compare
phage P. simiae OR1 MOI 0.1 +1.1 +4.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.2 +1.9 compare