Fitness data for PS417_22375 in Pseudomonas simiae WCS417

cold-shock protein
SEED: Cold shock protein CspA
KEGG: cold shock protein (beta-ribbon, CspA family)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.8)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -4.8 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.5 -0.8 compare
rhizosphere rhizosphere sample 8; outgrowth in LB -3.6 -1.3 compare
carbon source 2'-Deoxyinosine 5 mM (C) -3.4 -1.3 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -3.3 -1.0 compare
root root sample 6; outgrowth in LB -3.1 -1.0 compare
carbon source L-Valine (C) -2.6 -0.8 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -2.4 -1.0 compare
carbon source L-Valine (C) -2.2 -0.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.2 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.2 -0.8 compare
soil soil sample 3; outgrowth in LB -2.1 -0.9 compare
liquid stress Scopoletin 3 mM; liquid stress -2.0 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.9 -0.6 compare
phage P. simiae Grant Run MOI 10 -1.9 -0.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +1.8 +2.2 compare
carbon source Carbon source L-Citrulline 5 mM +2.0 +2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.0 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.1 +2.2 compare
carbon source Gly-Glu (C) +2.2 +4.4 compare