Fitness data for PS417_22365 in Pseudomonas simiae WCS417

serine dehydratase
SEED: L-serine dehydratase (EC 4.3.1.17)
KEGG: L-serine dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Gly-Glu (C) -1.0 -4.5 compare
nitrogen source Glycine (N) -0.9 -3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.0 compare
phage P. simiae ORA MOI 0.1 -0.6 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.7 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -2.2 compare
carbon source Inosine (C) -0.5 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.1 compare
carbon source L-Valine (C) -0.5 -2.2 compare
liquid stress Scopoletin 3 mM; liquid stress -0.5 -2.9 compare
motility_chemotaxis Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.5 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +3.1 compare
soil soil sample 5; outgrowth in LB +0.6 +1.8 compare
phage Wcs_0.1 +0.6 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.5 compare
phage Wcs_1 +0.7 +2.9 compare
soil soil sample 4; outgrowth in LB +0.7 +2.6 compare
seeds Growth on radish seeds for 72 hours +0.7 +2.0 compare
root root sample 6; outgrowth in LB +0.8 +1.7 compare