Fitness data for PS417_02180 in Pseudomonas simiae WCS417

proline:sodium symporter PutP
SEED: Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter
KEGG: sodium/proline symporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.4 -4.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -4.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.7 -3.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -2.5 compare
phage JP1 MOI 0.1 -0.8 -2.5 compare
solid stress Fraxetin 3 mM; solid stress -0.7 -2.5 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.7 -3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.6 compare
soil soil sample 8; outgrowth in LB -0.6 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.0 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.6 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +2.8 compare
stress Doxycycline hyclate 0.001 mg/ml +0.7 +3.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.4 compare
phage Wcs_1 +0.7 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.0 compare
stress Thallium(I) acetate 0.0625 mg/ml +0.7 +5.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +2.2 compare
seeds Growth on radish seeds for 72 hours +1.2 +2.0 compare