Fitness data for PS417_21840 in Pseudomonas simiae WCS417

chemotaxis protein
SEED: Methyl-accepting chemotaxis protein
KEGG: methyl-accepting chemotaxis protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
stress methylglyoxal 0.032 vol% -1.2 -2.2 compare
ecofab LB in EcoFAB_3.5mL -1.0 -2.5 compare
phage P. simiae Grant Run MOI 0.1 -1.0 -2.4 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.9 -2.6 compare
ecofab LB 0.5x in EcoFAB_3.5mL -0.9 -3.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.9 -2.2 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.9 -2.0 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) -0.8 -2.7 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.8 -2.0 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.8 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -1.4 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.7 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +1.6 compare
phage JP1 MOI 0.1 +0.7 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +3.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.1 +1.5 compare