Fitness data for PS417_21745 in Pseudomonas simiae WCS417

ABC transporter for L-Arginine, substrate-binding component (from data)
Original annotation: ABC transporter substrate-binding protein
SEED: Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein
KEGG: arginine/ornithine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source L-Arginine (C) -3.8 -13.1 compare
carbon source L-Arginine (C) -3.7 -10.8 compare
carbon source Carbon source L-Ornithine 10 mM -1.0 -3.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.0 -4.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -3.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -3.3 compare
carbon source Carbon source L-Ornithine 5 mM -0.9 -3.9 compare
stress Thallium(I) acetate 0.0625 mg/ml -0.7 -4.7 compare
carbon source Carbon source L-Ornithine 10 mM -0.7 -3.5 compare
solid stress Fraxetin 1 mM; solid stress -0.7 -2.7 compare
root root sample 6; outgrowth in LB +0.7 +1.0 compare
carbon source L-Alanine (C) +0.7 +4.2 compare
stress Gentamicin 0.008 mg/ml +0.7 +3.5 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.7 +1.7 compare
carbon source octanoate (C) +0.7 +4.2 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.8 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.9 compare
carbon source L-Alanine (C) +0.9 +5.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +2.4 compare