Fitness data for PS417_21405 in Pseudomonas simiae WCS417

hydrolase TatD
SEED: Putative deoxyribonuclease YcfH
KEGG: TatD DNase family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
soil soil sample 7; outgrowth in LB -0.7 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.4 compare
carbon source octanoate (C) -0.5 -2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.5 compare
phage P. simiae OR Antrim MOI 10 -0.5 -2.1 compare
motility_chemotaxis Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -2.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.4 compare
ecofab LB in EcoFAB_3.5mL -0.4 -1.9 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.4 -2.6 compare
phage JP1 MOI 10 +0.4 +1.7 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.4 compare
phage JP1 MOI 10 +0.4 +1.4 compare
nophagecontrol Only library +0.4 +1.8 compare
phage JP1 MOI 0.1 +0.5 +1.9 compare
soil soil sample 8; outgrowth in LB +0.5 +1.8 compare
carbon source 2-Deoxy-D-Ribose (C) +0.6 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +1.5 compare