Fitness data for PS417_21380 in Pseudomonas simiae WCS417

GntR family transcriptional regulator
SEED: Transcriptional regulator, GntR family
KEGG: GntR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 -3.1 compare
motility outer cut, LB soft agar motility assay -1.1 -3.6 compare
carbon source L-Histidine (C) -1.0 -3.0 compare
phage P. simiae Grant Run MOI 0.1 -0.8 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.8 -1.5 compare
root root sample 6; outgrowth in LB +0.8 +1.6 compare
liquid stress Fraxetin 1 mM; liquid stress +0.9 +2.5 compare
solid stress Scopoletin 0.5 mM; solid stress +0.9 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9 +0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.9 +3.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +1.7 compare
soil soil sample 5; outgrowth in LB +1.0 +2.2 compare
soil soil sample 3; outgrowth in LB +1.0 +2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.1 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.2 +2.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.3 +3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +2.5 compare
phage JP1 MOI 10 +1.5 +3.2 compare